Application of Bayesian network including Microcystis morphospecies for microcystin risk assessment in three cyanobacterial bloom-plagued lakes, China

Microcystis spp., which occur as colonies of different sizes under natural conditions, have expanded in temperate and tropical freshwater ecosystems and caused seriously environmental and ecological problems. In the current study, a Bayesian network (BN) framework was developed to access the probability of microcystins (MCs) risk in large shallow eutrophic lakes in China, namely, Taihu Lake, Chaohu Lake, and Dianchi Lake. By means of a knowledge-supported way, physicochemical factors, Microcystis morphospecies, and MCs were integrated into different network structures. The sensitive analysis illustrated that Microcystis aeruginosa biomass was overall the best predictor of MCs risk, and its high biomass relied on the combined condition that water temperature exceeded 24 °C and total phosphorus was above 0.2 mg/L. Simulated scenarios suggested that the probability of hazardous MCs (≥1.0 μg/L) was higher under interactive effect of temperature increase and nutrients (nitrogen and phosphorus) imbalance than that of warming alone. Likewise, data-driven model development using a naïve Bayes classifier and equal frequency discretization resulted in a substantial technical performance (CCI = 0.83, K = 0.60), but the performance significantly decreased when model excluded species-specific biomasses from input variables (CCI = 0.76, K = 0.40). The BN framework provided a useful screening tool to evaluate cyanotoxin in three studied lakes in China, and it can also be used in other lakes suffering from cyanobacterial blooms dominated by Microcystis

Comparative Studies on Microbial Community Structure and Production Performance of Jiang-Flavor Daqu in Different Areas of Maotai Town

The microbial community structure and diversity of Jiang-flavor Daqu (TS, WS, WM, MH and DJ) from different areas of Maotai town were analyzed by using the third-generation nanopore sequencing platform, and its physicochemical indexes and characteristic flavor substances were measured. The results showed that there were some similarities and differences between Daqu in different areas of Maotai town. In terms of microbial community structure, Bacillus, Saccharopolyspora, Weissella, Staphylococcus and Streptomyces were the common dominant bacterial genera in the five Daqu samples. Among them, Bacillus was the absolute dominant bacteria in MH and DJ. Aspergillus and Penicillium were the common dominant fungal genera, and the proportions of Lichtheimia and Saccharomycopsis in TS, WM and MH were significantly higher than those in DJ and WS. Compared with TS and WM, network correlation analysis showed that MH, DJ and WS had stronger interactions among dominant bacteria. In addition, redundancy analysis (RDA) showed that Weissella was positively correlated with esterification power, liquefaction power, saccharification power, acetic acid, ethyl acetate, ethyl lactate and n-pentanol. Lichtheimia was positively correlated with liquefaction power, saccharification power, acetic acid, isovaleric acid, 2,3-butanediol, phenylacetaldehyde and dibutyl phthalate. Saccharomycopsis was positively correlated with esterification power and ethyl acetate. Bacillus was positively correlated with 2,3,5,6-tetramethylpyrazine, propionic acid, isovaleric acid, dibutyl phthalate, 2,3-butanediol and phenacetaldehyde

Use statistical machine learning to detect nutrient thresholds in Microcystis blooms and microcystin management

The frequency of toxin-producing cyanobacterial blooms has increased in recent decades due to nutrient enrichment and climate change. Because Microcystis blooms are related to different environmental conditions, identifying potential nutrient control targets can facilitate water quality managers to reduce the likelihood of microcystins (MCs) risk. However, complex biotic interactions and field data limitations have constrained our understanding of the nutrient-microcystin relationship. This study develops a Bayesian modelling framework with intracellular and extracellular MCs that characterize the relationships between different environmental and biological factors. This model was fit to the across-lake dataset including three bloom-plagued lakes in China and estimated the putative thresholds of total nitrogen (TN) and total phosphorus (TP). The lake-specific nutrient thresholds were estimated using Bayesian updating process. Our results suggested dual N and P reduction in controlling cyanotoxin risks. The total Microcystis biomass can be substantially suppressed by achieving the putative thresholds of TP (0.10 mg/L) in Lakes Taihu and Chaohu, but a stricter TP target (0.05 mg/L) in Dianchi Lake. To maintain MCs concentrations below 1.0 μg/L, the estimated TN threshold in three lakes was 1.8 mg/L, but the effect can be counteracted by the increase of temperature. Overall, the present approach provides an efficient way to integrate empirical knowledge into the data-driven model and is helpful for the management of water resources

DetZero: Rethinking Offboard 3D Object Detection with Long-term Sequential Point Clouds

Existing offboard 3D detectors always follow a modular pipeline design to take advantage of unlimited sequential point clouds. We have found that the full potential of offboard 3D detectors is not explored mainly due to two reasons: (1) the onboard multi-object tracker cannot generate sufficient complete object trajectories, and (2) the motion state of objects poses an inevitable challenge for the object-centric refining stage in leveraging the long-term temporal context representation. To tackle these problems, we propose a novel paradigm of offboard 3D object detection, named DetZero. Concretely, an offline tracker coupled with a multi-frame detector is proposed to focus on the completeness of generated object tracks. An attention-mechanism refining module is proposed to strengthen contextual information interaction across long-term sequential point clouds for object refining with decomposed regression methods. Extensive experiments on Waymo Open Dataset show our DetZero outperforms all state-of-the-art onboard and offboard 3D detection methods. Notably, DetZero ranks 1st place on Waymo 3D object detection leaderboard with 85.15 mAPH (L2) detection performance. Further experiments validate the application of taking the place of human labels with such high-quality results. Our empirical study leads to rethinking conventions and interesting findings that can guide future research on offboard 3D object detection.Comment: 17 pages, 8 figure

A large area, high counting rate micromegas-based neutron detector for BNCT

Beam monitoring and evaluation are very important to boron neutron capture therapy (BNCT), and a variety of detectors have been developed for these applications. However, most of the detectors used in BNCT only have a small detection area, leading to the inconvenience of the full-scale 2-D measurement of the beam. Based on micromegas technology, we designed a neutron detector with large detection area and high counting rate. This detector has a detection area of 288 mm multiples 288 mm and can measure thermal, epithermal, and fast neutrons with different detector settings. The BNCT experiments demonstrated that this detector has a very good 2-D imaging performance for the thermal, epithermal, fast neutron and gamma components, a highest counting rate of 94 kHz/channel, and a good linearity response to the beam power. Additionally, the flux fraction of each component can be calculated based on the measurement results. The Am-Be neutron source experiment indicates that this detector has a spatial resolution of approximately 1.4 mm, meeting the requirements of applications in BNCT. It is evident that this micromegas-based neutron detector with a large area and high counting rate capability has great development prospects in BNCT beam monitoring and evaluation applications

An Innovative Pose Determination Algorithm for Planetary Rover Onboard Visual Odometry

Planetary rovers play a critical role in space exploration missions, where one of the most fundamental algorithms is pose determination. Due to environmental and computational constraints, real-time pose determinations of planetary rovers can only use low-cost techniques, such as visual odometry. In this paper, by employing the angle-based criterion, a novel pose determination algorithm is proposed for visual odometry, which is suitable for any type of central camera. First, the problem is formulated using the Huber kernel function with respect to the angular residuals. Then, an intermediate coordinate system is introduced between the initial estimation and final refinement. In order to avoid being trapped in periodic local minimums, a linear method is used to further align the reference points between the intermediate and camera coordinate systems. Finally, one step refinement is implemented to optimize pose determinations. The theoretical analysis, the synthetic simulations, and the real experiments show that our proposed algorithm can achieve the best accuracies within similar processing times, compared with the most state-of-the-art algorithms, thereby approving the effectiveness of the proposed algorithm used in planetary rover onboard visual odometry

Robust Vision-Based Control of a Rotorcraft UAV for Uncooperative Target Tracking

This paper investigates the problem of using an unmanned aerial vehicle (UAV) to track and hover above an uncooperative target, such as an unvisited area or an object that is newly discovered. A vision-based strategy integrating the metrology and the control is employed to achieve target tracking and hovering observation. First, by introducing a virtual camera frame, the reprojected image features can change independently of the rotational motion of the vehicle. The image centroid and an optimal observation area on the virtual image plane are exploited to regulate the relative horizontal and vertical distance. Then, the optic flow and gyro measurements are utilized to estimate the relative UAV-to-target velocity. Further, a gain-switching proportional-derivative (PD) control scheme is proposed to compensate for the external interference and model uncertainties. The closed-loop system is proven to be exponentially stable, based on the Lyapunov method. Finally, simulation results are presented to demonstrate the effectiveness of the proposed vision-based strategy in both hovering and tracking scenarios

Motion Blurred Star Image Restoration Based on MEMS Gyroscope Aid and Blur Kernel Correction

Under dynamic conditions, motion blur is introduced to star images obtained by a star sensor. Motion blur affects the accuracy of the star centroid extraction and the identification of stars, further reducing the performance of the star sensor. In this paper, a star image restoration algorithm is investigated to reduce the effect of motion blur on the star image. The algorithm includes a blur kernel calculation aided by a MEMS gyroscope, blur kernel correction based on the structure of the star strip, and a star image reconstruction method based on scaled gradient projection (SGP). Firstly, the motion trajectory of the star spot is deduced, aided by a MEMS gyroscope. Moreover, the initial blur kernel is calculated by using the motion trajectory. Then, the structure information star strip is extracted by Delaunay triangulation. Based on the structure information, a blur kernel correction method is presented by utilizing the preconditioned conjugate gradient interior point algorithm to reduce the influence of bias and installation deviation of the gyroscope on the blur kernel. Furthermore, a speed-up image reconstruction method based on SGP is presented for time-saving. Simulated experiment results demonstrate that both the blur kernel determination and star image reconstruction methods are effective. A real star image experiment shows that the accuracy of the star centroid extraction and the number of identified stars increase after restoration by the proposed algorithm

Secure genotype imputation using homomorphic encryption

Genotype imputation estimates missing genotypes from the haplotype or genotype reference panel in individual genetic sequences, which boosts the potential of genome-wide association and is essential in genetic data analysis. However, the genetic sequences involve people’s privacy, confirming an individual’s identification and even disease information. This work proposes a secure genotype imputation model, which uses a linear regression model and the homomorphic encryption scheme over ciphertext to impute missing genotypes. The inference model is trained with float plaintext parameters, which are round into integers to avoid high complexity homomorphic evaluation on float number operations without bootstrapping operations. Even though the rounding parameters in the inference model are not the same as those in the trained model, We find that it will no effect on the outcome of the homomorphic prediction. Thus, a high-efficiency genotype imputation inference model over the ciphertext is obtained while keeping the high-security level. The simulation results indicate that the accuracy of the secure inference model is almost the same as the original model trained on float parameters. The secure inference model’s accuracy is 98.6% for a single genotype

Synthesis and Morphological Control of Biocompatible Fluorescent/Magnetic Janus Nanoparticles Based on the Self-Assembly of Fluorescent Polyurethane and Fe₃O₄ Nanoparticles

Functionalized Janus nanoparticles have received increasing interest due to their anisotropic shape and the particular utility in biomedicine areas. In this work, a simple and efficient method was developed to prepare fluorescent/magnetic composite Janus nanoparticles constituted of fluorescent polyurethane and hydrophobic nano Fe3O4. Two kinds of fluorescent polyurethane prepolymers were synthesized by the copolymerization of fluorescent dye monomers, and the fluorescent/magnetic nanoparticles were fabricated in one-pot via the process of mini-emulsification and self-assembly. The nanostructures of the resulting composite nanoparticles, including core/shell and Janus structure, could be controlled by the phase separation in assembly process according to the result of transmission electron microscopy, whereas the amount of the nonpolar segments of polyurethane played an important role in the particle morphology. The prominent magnetic and fluorescent properties of the Janus nanoparticles were also confirmed by vibrating magnetometer and confocal laser scanning microscope. Furthermore, the Janus nanoparticles featured excellent dispersity, storage stability, and cytocompatibility, which might benefit their potential application in biomedical areas